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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38677997
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKRNNFYM RSLFLLALGI FGLLQYNNFN YLDSRDNVLG DAVTNDSDDA ILAMVPATLH  60
   61 KYLTPHSRNH SASGAGVLNG AALLLNASSP GAATASTISF DVYHPPNITE IKRQIVRYND 120
  121 MQMVLNEDVF GPLQNDSVII VVQVHTRITY LRHLIVSLAQ ARDISKVLLV FSHDYYDDDI 180
  181 NDLVQQIDFC KVMQIFYPYS IQTHPNEYPG VDPNDCPRNI KKEQALITNC NNAMYPDLYG 240
  241 HYREAKFTQT KHHWIWKANR VFNELEVTRY HTGLVLFLEE DHYVAEDFLY LLAMMQQRTK 300
  301 DLCPQCNVLS LGTYLKTFNY YTYHSKTNKK SYASSLISTN SLLGYNRNNN RNSVQLAVSS 360
  361 SYSSSSSAQS PPPSKVYVGD TSDNQRASDS SSRRGNLINT VTATATATAA TSDTSNNEQS 420
  421 SHSSSKNGAQ TWNYHVLPSL YSVYQKVEVM PWVSSKHNMG FAFNRTTWSN IRKCARHFCT 480
  481 YDDYNWDWSL QHVSQQCLRR KLHAMIVKGP RVFHIGECGV HHKNKNCESN QVISKVQHVL 540
  541 RIARNSHQLF PRSLTLTVPS LMKKSKLRKG NGGWGDMRDH ELCLNMTLAT R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle