YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41349753
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNSLFSAV TPCQQNFFWD PSTSRRFSPP SSSLQPGKMS DVSPVVAAQQ QQQQQQQQQQ  60
   61 QQQQQQQQQQ QQQQQQQEAA AAAAAAAAAA AAAAAVPRLR PPHDNRTMVE IIADHPAELV 120
  121 RTDSPNFLCS VLPSHWRCNK TLPVAFKVVA LGEVPDGTVV TVMAGND

Type	Start	End	Confidence
Non-Cytoplasmic	1	78	0.95
Transmembrane Helix	79	99	0.69
Cytoplasmic	100	167	0.69