YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190404466, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWLEGYRAP SKFRGLWHRA VRLLAPHVPS VTGAIGWSLF FCEPAAAQAA GGTDPATMVN  60
   61 NICTFILGPF GQSLAVLGIV AIGVSWMFGR ASLGLVAGVV GGIVIMFGAS FLGQTLTGGG 120
  121 G

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	61	0.89
Transmembrane Helix	62	86	0.85
Cytoplasmic	87	92	0.76
Transmembrane Helix	93	113	0.93
Non-Cytoplasmic	114	121	0.78