YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13509256
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLMLTDGT WNVLSKVMYL SGRIYNKPDH RKTLEGILYK MRTGIPWRDL PSDFGRWSAI  60
   61 YRRFNLWSKK GILNELFRAL SRDADMDWVF IDGSIVRAHQ HSCGARTADN ESIGKSRGGN 120
  121 STKIHLAVDS GGLPVYYELS CGNTHDIVHA ESLVANCPTS NMVVADKGYD SEKLRAFVRD 180
  181 NNATPVIPRK GNSLVGNEDI DWCMYKYRHL VENAFGRIKQ YRGIATRYEK LERNYHSMLA 240
  241 LAFTMMWLPM WAD

Type	Start	End	Confidence
Cytoplasmic	1	233	0.62
Transmembrane Helix	234	251	0.63
Non-Cytoplasmic	252	253	0.84