YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40788933
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELPSRLAARM ATPASAPDTR ALVADFVGYK LRQKGYVCGA GPGEGPAADP LHQAMRAAGD  60
   61 EFETRFRRTF SDLAAQLHVT PGSAQQRFTQ VSDELFQGGP NWGRLVAFFV FGAALCAESV 120
  121 NKEMEPLVGQ VQEWMVAYLE TRLADWIHSS GGWAEFTALY GDGALEEARR LREGNWASVR 180
  181 TVLTGAVALG ALVTVGAFFA SK

Type	Start	End	Confidence
Cytoplasmic	1	178	0.88
Transmembrane Helix	179	200	0.93
Non-Cytoplasmic	201	202	0.83