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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP26B_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFESFDLVS ALATLAACLV SMALLLAVPQ QLWQLRWTAT RDKSCKLPMP KGSMGFPIIG  60
   61 ETCHWFFQGA GFHASRRQKY GNVFKTHLLG RPLIRVTGAE NVRKVLMGEH SLVTVDWPQS 120
  121 TSTLLGPNSL ANSIGDIHRK RRKIFAKVFS HEALESYLPK IQQVIQETLR VWSSNPDPIN 180
  181 VYRESQRLSF NMAVRVLLGF RIPEEEMHCL FSTFQEFVEN VFSLPIDLPF SGYRKGIRAR 240
  241 DSLQKSIEKA IREKPLHTQG KDYTDALDVL LESAKENNTE LTMQELKEST IELIFAAFAT 300
  301 TASASTSLVM QLLRHPAVLE KLREELRSCG LLHDGCLCQG ELRLDSIISL KYLDCVIKEV 360
  361 LRLFAPVSGG YRIATQTFEL DGVQVPKGWS VMYSIRDTHD TSAVFKDVEA FDPDRFSPER 420
  421 SEDREGRFHY LPFGGGVRSC LGKQLATLFL KLLAVELAGG SRFELSTRTF PRMISVPVVH 480
  481 PTDGLRVKFF GLDSNQNQIM AKSDEMLDAT V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle