YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30109288
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGGWRWAR KALAAGRPLF QGRALLLTNT LGCGVLMAAG DGARQVWEVR ARPGQRFSAR  60
   61 RSASMFAVGC SMGPFLHFWY LWLDRLLPAS GLRSLPSVMK KVLVDQTVAS PILGVWYFLG 120
  121 LGSLEGHTLE ESCQELRAKF WDFYKADWCV WPAAQLVNFL FIPSHFRVTY INGLTLGWDT 180
  181 YLSYLKYWVP EPLQTPGCAD

Type	Start	End	Confidence
Cytoplasmic	1	18	0.86
Transmembrane Helix	19	40	0.89
Non-Cytoplasmic	41	61	0.78
Transmembrane Helix	62	83	0.91
Cytoplasmic	84	101	0.82
Transmembrane Helix	102	120	0.75
Non-Cytoplasmic	121	200	0.53