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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40788386
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRWRRGAGRA EREGRRWLCR MATAAYEQLK LHITPEKFYV EACDDGADDV LTIDRVSTEV  60
   61 TLAVKKDVPP SAVTRPIFGI LGTIHLVAGN YLIVITKKIK VGEFFSHVVW KATDFDVLSY 120
  121 KKTMLHLTDI QLQDNKTFLA MLNHVLNVDG FYFSTTYDLT HTLQRLSNTS PEFQEMSLLE 180
  181 RADQRFVWNG HLLRELSAQP EVHRFALPVL HGFITMHSCS INGKYFDWIL ISRRSCFRAG 240
  241 VRYYVRGIDS EGHAANFVET EQIVHYNGSK ASFVQTRGSI PVFWSQRPNL KYKPLPQISK 300
  301 VANHMDGFQR HFDSQVIIYG KQVIINLINQ KGSEKPLEQT FATMVSSLGS GMMRYIAFDF 360
  361 HKECKNMRWD RLSILLDQVA EMQDELSYFL VDSAGQVVAN QEGVFRSNCM DCLDRTNVIQ 420
  421 SLLARRSLQA QLQRLGVLHV GQKLEEQDEF EKIYKNAWAD NANACAKQYA GTGALKTDFT 480
  481 RTGKRTHLGL IMDGWNSMIR YYKNNFSDGF RQDSIDLFLG NYSVDELESH SPLSVPRDWK 540
  541 FLALPIIMVV AFSMCIICLL MAGDTWTETL AYVLFWGVAS IGTFFIILYN GKDFVDAPRL 600
  601 VQKEKID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle