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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40788282
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPARELAAAL QPFPVSGRWV GCGAGLGAAA AAATAYRACL APGAARKMRP EPGGCCCRRT  60
   61 VRANGCVANG EVRNGYVRSS AAAAAAAAAG QIHHVTQNGG LYKRPFNEAF EETPMLVAVL 120
  121 TYVGYGVLTL FGYLRDFLRY WRIEKCHHAT EREEQKDFVS LYQDFENFYT RNLYMRIRDN 180
  181 WNRPICSVPG ARVDIMERQS HDYNWSFKYT GNIIKGVINM GSYNYLGFAR NTGSCQEAAA 240
  241 KVLEEYGAGV CSTRQEIGNL DKHEELEELV ARFLGVEAAM AYGMGFATNS MNIPALVGKG 300
  301 CLILSDELNH ASLVLGARLS GATIRIFKHN NMQSLEKLLK DAIVYGQPRT RRPWKKILIL 360
  361 VEGIYSMEGS IVRLPEVIAL KKKYKAYLYL DEAHSIGALG PTGRGVVEYF GLDPEDVDVM 420
  421 MGTFTKSFGA SGGYIGGKKE LIDYLRTHSH SAVYATSLSP PVVEQIITSM KCIMGQDGTS 480
  481 LGKECVQQLA ENTRYFRRRL KEMGFIIYGN EDSPVVPLML YMPAKIGAFG REMLKRNIGV 540
  541 VVVGFPATPI IESRARFCLS AAHTKEILDT ALKEIDEVGD LLQLKYSRHR LVPLLDRPFD 600
  601 ETTYEETED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle