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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114556550
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYRRVTSGR LLSLAAPKMA SIMEGPLSKW TNVMKGWQYR WFVLDYNAGL LSYYTSKDKM  60
   61 MRGSRRGCVR LRGAVIGIDD EDDSTFTITV DQKTFHFQAR DADEREKWIH ALEETILRHT 120
  121 LQLQGLDSGF VPSVQDFDKK LTEADAYLQI LIEQLKLFDD KLQNCKEDEQ RKKIETLKET 180
  181 TNSMVESIKH CIVLLQIAKS TINPVDAIYQ PSPLEPVIST MPSQTVLPPE PVQLCKSEQR 240
  241 PSSLPVGPVL ATLGHHQTPT PNSTGSGHSP PSSSLTSPSH VNLSPNTVPE FSYSSSEDEF 300
  301 YDADEFHQSG SSPKRLIDSS GSASVLTHSS SGNSLKRPDT TESLNSSLSN GTSDADLFDS 360
  361 HDDRDDDAEA GSVEEHKSVI MHLLSQVRLG MDLTKVVLPT FILERRSLLE MYADFFAHPD 420
  421 LFVSISDQKD PKDRMVQVVK WYLSAFHAGR KGSVAKKPYN PILGEIFQCH WTLPNDTEEN 480
  481 TELVSEGPVP WVSKNSVTFV AEQVSHHPPI SAFYAECFNK KIQFNAHIWT KSKFLGMSIG 540
  541 VHNIGQGCVS CLDYDEHYIL TFPNGYGRSI LTVPWVELGG ECNINCSKTG YSANIIFHTK 600
  601 PFYGGKKHRI TAEIFSPNDK KSFCSIEGEW NGVMYAKYAT GENTVFVDTK KLPIIKKKVR 660
  661 KLEDQNEYES RSLWKDVTFN LKIRDIDAAT EAKHRLEERQ RAEARERKEK EIQWETRLFH 720
  721 EDGECWVYDE PLLKRLGAAK H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle