YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13436044
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSHYIVLAL ASLTFLLCLP VSQSCNKALC ASDVSKCLIQ ELCQCRPGEG NCPCCKECML  60
   61 CLGALWDECC DCVGRCNPRN YSDTPPTSKS TVEELHEPIP SLFRALTEGD TQLNWNIVSF 120
  121 PVAEELSHHE NLVSFLETVN QLHHQNVSVP SNNVHAPFPS DKERMCTVVY FDDCMSIHQC 180
  181 KISCESMGAS KYRWFHNACC ECIGPECIDY GSKTVKCMNC MF

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	222	0.99