YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42542960
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETAEKTPV EAYSTLKPKG LMKMKKTALV AFIAGAALLL FGGVGAFYLW KVTEKEAISA  60
   61 HLGRNIDIKI ENDSDSAEGT IVEVQDFKAG ITAVKFPGKE KCFIKSQART ELSEDEAGVK 120
  121 AEVASLVWIT SEEPLKDSSF LSPEILRFCA DLPIYWHHPA NSRALRKRRS ATRMRRQTSA 180
  181 GVNRQPARRR NSTASARDER PTGPEYNPEN PYHQQNQGSE GTMVFDPMLD HRGICCTECH 240
  241 RSYTHCERVC EPLGGYWPWP YNYHGCRPVC RLIMPCRWWA ARVLGLV

Type	Start	End	Confidence
Cytoplasmic	1	27	0.93
Transmembrane Helix	28	50	0.94
Non-Cytoplasmic	51	287	0.96