YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47939022
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACILKRKPA LAVSFIALCI LLLAMRLAND VTFPLLLNCF GQPKTKGIPL SYTLRQPLQT  60
   61 HYGYINVRTQ EPLQLNCNHC AVVSNSGQMV GQKVGEEIDR ASCIWRMNNA PTKGFEEDVG 120
  121 YMTMVRVVSH TSVPLLLKNP DYFFKEASTT IYVIWGPFRN MRKDGNGIVY NMLKKTVDTY 180
  181 PDAQIYVTTE QRMTYCDGVF KDETGKDRVQ SGSYLSTGWF TFILAMDACY SIHVYGMINE 240
  241 TYCTTEGYRK VPYHYYEQGK DECNEYLLHE HAPYGGHRFI TEKKVFAKWA KKHRIVFTHP 300
  301 NWTVS

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	305	0.99