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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: H6ST2_DANRE
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGKSNYSRL LIALLMILFF GGIVLQYICS TSDWQLLHLA SLSSRLGSRA PGDRLNGAGA  60
   61 GDPYSSEDGA LVRFVPRFNF TTKDLSRAVD FHIKGDDVIV FLHIQKTGGT TFGRHLVRNI 120
  121 QLERPCECHA GQKKCTCYRP GKRDTWLFSR FSTGWSCGLH ADWTELTNCV PSFMSNRESQ 180
  181 ERRMTPSRNY YYITILRDPV WRYLSEWRHV QRGATWKASK HMCDGRLPTL TELPSCYPGD 240
  241 DWSGCSLEEF MVCPYNLANN RQTRMLADLS LVGCYNLTVM SENQRWAMLL ESAKRNLRNM 300
  301 AFFGLTEYQR KTQYLFEHTF RLSFIAPFTQ LNGTRAASVE VEPETQRRIR ELNQWDVELY 360
  361 EYARDLFLQR FQFARQQERR EARQRRIQER RKLRAKVKSW LGVTGKAVFK PTKEPPMTEQ 420
  421 SPAFAEEKQA DAERTLESET EGQVEENWLE EDDGEIMLDY LENVEQWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle