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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LEVS_LACSN
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEHKKMYK AGKYWAVATL VSASILMEVG VTTHADAVEN NKYDGTANVN IDCQANVDGK  60
   61 IISTDDNATS GSTKQESSIA NDNATSGSTK QESSIANDNA TSGSTKQESS IANDNATSGS 120
  121 TKQESSVAND NATSGSTKQE SSVANDNATS GSTKQESSVA NDNATSGSTK QESSVANDTK 180
  181 TAVVDESKNT SNTENDNSQL KQTNNEQPSA ATQANLKKLN HEAAKAVQNA KIDAGSLTDE 240
  241 QINELNKINF SKSAEKGAKL TFKDLEGIGN AIVKQDPQYA VPYFNAKEIK NMPASYTVDA 300
  301 QTGKMAHLDV WDSWPVQDPT GYVSNYKGYQ LVIAMMGIPN TPNGDNHIYL LYNKYGDNDF 360
  361 SHWRNAGSIF GTNENNVYQE WSGSAIVNDN GTIQLFYTSN DTSDYKLNDQ RLATATLNLD 420
  421 VDDNGVAIKS VDNYHILFEG DGFHYQTYDQ FANGKDRKND DYCLRDPHVV QSENGDRYLV 480
  481 FEANTGMEDY QSDDQIYNWA NYGGDDAFNI KSFFKLLNNK NDRELASLAN GAIGILKLNN 540
  541 DQTNPKVEEV YSPLVSTLMA SDEVERVNVV KLGDKYYLFS ATRVSRGSDR ELNAKDITIV 600
  601 GDNVAMIGYV SDNLMGKYKP LNNSGVVLTA SVPANWRTAT YSYYAVPVEG HPDQVLITSY 660
  661 MSNKDFASGE GNYATLAPSF IVQINPDDTT TVLARATNQG DWVWDDSSRN DNMLGVLKEG 720
  721 AVNSAALPGE WGKPVDWSLI NRSSGLGLKP HQPVNPSQPT TPATPVNPSQ PTTPATPVNP 780
  781 SQPTTPATPV NPSATTTPAT PVNPSATTTP AKPVNPSQPT TPAKPVQAGQ ATATNFVDQR 840
  841 LPQTGENNSQ SQTMSFIGIL LAMFGSLLGF LGIKKRRND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle