YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADRM1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSGALFPS LVPGSRGSST KYLVEFRAGK MSLKGTTVTP DKRKGLVYIQ QTDDSLIHFC  60
   61 WKDRTSGTVE DDLIIFPDDC EFKRVPQCPS GRVYVLKFKA GSKRLFFWMQ EPKTDQDEEH 120
  121 CRKVNECLNN PPMPGTLGAS GSSGHELSAL GGEGGLQSLL GNMSHSQLMQ LIGPAGLGGL 180
  181 GGLGALTGPG LASLLGSSGP PASSSSSSSR SQSAAVTPSS TTSSARATPA PSAPAAASAT 240
  241 SPSPAPSSGN GTSTAASPTQ PIQLSDLQSI LATMNVPAGP GGSQQVDLAS VLTPEIMAPI 300
  301 LANADVQERL LPYLPSGESL PQTAEEIQNT LTSPQFQQAL GMFSAALASG QLGPLMCQFG 360
  361 LPAEAVEAAN KGDVEAFAKA MQNNAKSDPK EGDTKDKKDE EEDMSLD

Type	Start	End	Confidence
Signal Peptide	1	17	0.61
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	407	0.75