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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38512106, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.74
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPIVLLLL LWLGALAPTP GSASSEAPPL VNEDVKRTVD LSSHLAKVTA EVVLAHPGGG  60
   61 STARASSFVL ALEPELESRL AHLGVQVKGE DEEDNNLEVR ETKMKGKSGR FFTVKLPVAL 120
  121 DPGSKISIVV ETVYTHVLHP YPTQITQSEK QFVVFEGNHY FYSPYPTKTQ TMRVRLASRN 180
  181 VESHTKLGNP SRSEDILDYG PFKDIPAYSQ DTFKVHYENN SPFLTITSMT RVIEVSHWGN 240
  241 IAVEENVDLK HTGAVLKGPF SRYDYQRQPD SGISSIRSFK TILPAAAQDV YYRDEIGNVS 300
  301 TSHLLILDDS VEMEIRPRFP LFGGWKTHYI VGYNLPSYEY LYNLGDQYAL KMRFVDHVFD 360
  361 EQVIDSLTVK IILPEGAKNI QVDSPYDISR APDELHYTYL DTFGRPVIVA YKKNLVEQHI 420
  421 QDIVVHYTFN KVLMLQEPLL VVAAFYILFF TVIIYVRLDF SITKDPAAEA RMKVACITEQ 480
  481 VLTLVNKRLG LYRHFDETVN RYKQSRDIST LNSGKKSLET EHKAVTSEIA VLQSRLKTEG 540
  541 SDLCDRVSEM QKLDAQVKEL VLKSAVEAER LVAGKLKKDT YIENEKLSSG KRQELVTKID 600
  601 HILDAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle