YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28556857, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLHFSFYS AFTFSSLGLA FHRTHLISAL LCLESMMLSM FIPLSMWPVQ NQTPSFTITP  60
   61 ILMLAFSACE AGTGLAMLVA STRTHGSDHL HNLNLLQC

Type	Start	End	Confidence
Cytoplasmic	1	20	0.70
Transmembrane Helix	21	44	0.83
Non-Cytoplasmic	45	57	0.68
Transmembrane Helix	58	80	0.88
Cytoplasmic	81	98	0.82