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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37360558
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSESAAVRRH RGTAERREGE AAASHRQREA SAQEDAKGVG RMWGKTENGG GSRVAKTALS  60
   61 EARTALALAL YLLALRALVQ LSLQRLVLSR TSGLQGEFDA RQARDYLEHI TAIGPRTTGS 120
  121 TENEILTVQY LLEQIKLIEA QSNSLHSISV DIQRPTGSFS IDFLGGFTSY YDNITNVVVK 180
  181 LEPRDGAESA ILANCHFDSV ANSPGASDDA VSCAVMLEVL RVMSASPEPM QHAVVFLFNG 240
  241 AEENVLQASH GFITQHPWAS LIRAFINLEA AGVGGKELVF QTGPENPWLV QAYVSAAKHP 300
  301 FASVVAQEVF QSGIIPSDTD FRIYRDFGNI PGIDLAFIEN GYIYHTKYDT ADRILIDSIQ 360
  361 RAGDNILAVL KHLATSDTLA SSSEYRHGSM VFFDVLGLLV IAYPSRVGSI INYMVVMAVV 420
  421 LYLGKKLLRP KHRNANYMRD FLCGLGITFI SWFTSLVTVL IIAVFISLIG QSLSWYNYFY 480
  481 IAVCLYGTAT VAKIIFIHTL AKRFYYMNAS DLYLGELFFD TSLFVHCAFL VALTYQGFCS 540
  541 AFMSAVWVVF PLLTKLCVYK DFKKHGAQGR FVALYLLGMF IPYLYGLYLI WAVFEMFTPI 600
  601 LGRSGSEIPP DVVLASILAV CVMILSSYFI TFIYLVNSTK KTILTLILVC AVTFLLVCSG 660
  661 AFFPYSSNPE SPKPKRVFLQ HVSRTFHNLE GSVVKRDSGI WINGFDYTGM SHVTPHIPEI 720
  721 NDTIRAHCEE DAPLCGFPWY LPVHFLIRKN WYLPAPEVSP RNPAHFRLVS KEKMPWDSIK 780
  781 LTFEATGPSH MSFYVRTHKG STLSQWSLGN GIPVTSRGGD YFVFYSHGLQ ASAWRFWIEV 840
  841 QVSEEQAEGM VTVAIAAHYL SGENKRSSQL DALKKKFPDW SFPSAWVSTY SLFVF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle