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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37360078
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLRKVSFQHP RVPKEGTHQC RLWTSQERLT DLCALWQPGV FLPSADGSRA SAGVGKSRPN  60
   61 EAEKLSTVWK AHIERHKASG ARGLGSGEQG LVLRMARQQA PPWVHIALIL FLLSLGGAIE 120
  121 IPMDLTQPPT ITKQSVKDHI VDPRDNILIE CEAKGNPAPS FHWTRNSRFF NIAKDPRVSM 180
  181 RRRSGTLVID FRSGGRPEEY EGEYQCFARN KFGTALSNRI RLQVSKSPLW PKENLDPVVV 240
  241 QEGAPLTLQC NPPPGLPSPV IFWMSSSMEP ITQDKRVSQG HNGDLYFSNV MLQDMQTDYS 300
  301 CNARFHFTHT IQQKNPFTLK VLTTRGVAER TPSFMYPQGT SSSQMVLRGM DLLLECIASG 360
  361 VPTPDIAWYK KGGDLPSNKA KFENFNKALR ITNVSEEDSG EYFCLASNKM GSIRHTISVR 420
  421 VKAAPYWLDE PKNLILAPGE DGRLVCRANG NPKPTVQWMV NGEPLQSAPP NPNREVAGDT 480
  481 IIFRDTQISS RAVYQCNTSN EHGYLLANAF VSVLDVPPRM LSARNQLIRV ILYNRTRLDC 540
  541 PFFGSPIPTL RWFKNGQGSN LDGGNYHVYE NGSLEIKMIR KEDQGIYTCV ATNILGKAEN 600
  601 QVRLEVKDPT RIYRMPEDQV AKRGTTVQLE CRVKHDPSLK LTVSWLKDDE PLYIGNRMKK 660
  661 EDDSLTIFGV AERDQGSYTC MASTELDQDL AKAYLTVLGR PDRPRDLELT DLAERSVRLT 720
  721 WIPGDDNNSP ITDYVVQFEE DQFQPGVWHD HSRFPGSVNS AVLHLSPYVN YQFRVIAVNE 780
  781 VGSSHPSLPS ERYRTSGAPP ESNPSDVKGE GTRKNNMEIT WTPMNATSAF GPNLRYIVKW 840
  841 RRRETRETWN NVTVWGSRYV VGQTPVYVPY EIRVQAENDF GKGPEPDTII GYSGEDYPRA 900
  901 APTEVKIRVL NSTAISLQWN RVYSDTVQGQ LREYRAYYWR ESSLLKNLWV SQKRQQASFP 960
  961 GDRPRGVVAR LFPYSNYKLE MVVVNGRGDG PRSETKEFTT PEGVPSAPRR FRVRQPNLET1020
 1021 INLEWDHPEH PNGILIGYIL RYVPFNGTKL GKQMVENFSP NQTKFSVQRA DPVSRYRFSL1080
 1081 SARTQVGSGE AATEESPAPP NEATPTAAYT NNQADIATQG WFIGLMCAIA LLVLILLIVC1140
 1141 FIKRSRGGKY PVREKKDVPL GPEDPKEEDG SFDYSDEDNK PLQGSQTSLD GTIKQQESDD1200
 1201 SLVDYGEGGE GQFNEDGSFI GQYTVKKDKE ETEGNESSEA TSPVNAIYSL A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle