YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGP18_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRNFLLTVT LICIVVAGVG GQSPISSPTK SPTTPSAPTT SPTKSPAVTS PTTAPAKTPT  60
   61 ASASSPVESP KSPAPVSESS PPPTPVPESS PPVPAPMVSS PVSSPPVPAP VADSPPAPVA 120
  121 APVADVPAPA PSKHKKTTKK SKKHQAAPAP APELLGPPAP PTESPGPNSD AFSPGPSADD 180
  181 QSGAASTRVL RNVAVGAVAT AWAVLVMAF

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	209	0.98