YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30388705
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGTSNYWE DLRKQARQLE NELDLKLVSF SKLCTSYSHS GSRDGGRDRY SSGTTPLLNG  60
   61 SSQDRMFETM AIEIEQLLAR LTGVNDKMAE YTHSAGVPSL NAALMHTLQR HRDILQDYTH 120
  121 EFHKTKANFT AIRERENLMG SVRKDIESYK SGSGVNNRRT ELFLKEHDHL RNSDRLIEET 180
  181 ISIAMATKEN MTSQRGMLKS IHSKMNTLAN RFPAVNSLIQ RINLRKRRDS LILGGVIGIC 240
  241 TILLLLYAFH

Type	Start	End	Confidence
Cytoplasmic	1	229	0.94
Transmembrane Helix	230	249	0.96
Non-Cytoplasmic	250	250	0.95