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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61557272, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPVLKVLLF LTLHLLQDTK SFKVHLNNNG YEGVVIAINP SVPEDERLIP SLKEMVTQAS  60
   61 TYLFEASQGR FYFRNVSILV PMTWKSKSEY LMPKRESYDK ADVIVANSHL KYGDNPYTLQ 120
  121 YGQCGDRGRY IHFTPNFLLT DNVRNYGPRG RVFVHEWAHL RWGVFDEYNE DRPFYISGKN 180
  181 TIEVTRCSTD IKGSKAVHER QRGSDVTRLC RWDSRTGLYE PKCKFFPDKI QTARASIMFM 240
  241 QNLNSVVEFC TEKTHNTEAP NLQNKICNGR STWDVIKESA DFQQAPPMRG TEAPPPPTFS 300
  301 LLKSRQRVIC LVLDKSGSMD TEDRLIRMNQ AAELYLTQIV EKESMVGLVT FDSTAQIQNY 360
  361 LIKITNTGDY KKITGNLPQQ AVGGTSICRG LEAGFQAITS SDQSTSGSEI VLLTDGEDDL 420
  421 ISSCFEVVKH SGAVIHTIAL GPKAARELET LSDMTGGLRF YANKDVNSLM DAFSGISSAS 480
  481 GNLSQQALQL ESKAFNIGGG TWINGTVPVD STIGNDTFFV ITWTVQKPEI ILRDPKRKKY 540
  541 TTSDFQDNKL NIRSARLQIP GTAETGTWTY SLFNKGVKPQ LLTVTVTTRA RSPTTQPLMA 600
  601 TAHMSQSTAQ YPSPMIVYAR VSQGFLPVLG ANVTAVIESE NGSRVTLELW DNGAGADTVK 660
  661 NDGIYTRYFT DYHGNGRYSL KVRVQARKSK ARLSLRQKNK SLYIPGYVEN GKIILNPPRP 720
  721 EVPEEATEAA VEDFSRLTSG ESFTVSGAPP DGGHAHVFPP SKVTDLEAEF KGDHIHLTWT 780
  781 APGKVLDKGR AHRYVIRMSR HPPGLQDFND ATLVNTSGLI PKEAGSEETF KFKPASFKIE 840
  841 NGTQLYIAIL ANNEAGLTSE VSNIAQAVNF IPPEHSFSTL SPDISAICLT IWGLTVILND 900
  901 ILN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle