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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22252973
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLNIFFILK GEMAMRSQKF TLLLLSLLLF LPLFLTNFIT PNLALADSPK QSQKIVGYFP  60
   61 SWGVYGRNYQ VADIDASKLT HLNYAFADIC WNGKHGNPST HPDNPNKQTW NCKESGVPLQ 120
  121 NKEVPNGTLV LGEPWADVTK SYPGSGTTWE DCDKYARCGN FGELKRLKAK YPHLKTIISV 180
  181 GGWTWSNRFS DMAADEKTRK VFAESTVSFL RAYGFDGVDL DWEYPGVETI PGGSYRPEDK 240
  241 QNFTLLLQDV RNALNKAGAE DGKQYLLTIA SGASQRYADH TELKKISQIL DWINIMTYDF 300
  301 HGGWEATSNH NAALYKDPND PAANTNFYVD GAIDVYTNEG VPVDKLVLGV PFYGRGWKSC 360
  361 GKENNGQYQP CKPGSDGKLA SKGTWDDYST GDTGVYDYGD LAANHVNKNG FVRYWNDTAK 420
  421 VPYLYNATTG TFISYDDNES MKYKTDYIKT KGLSGAMFWE LSGDCRTSPK YSCSGPKLLD 480
  481 TLVKELLGGP ISQKDTEPPT NVKNIVVTNK NSSSVQLSWT ASTDNVGVTE YEITAGEEKW 540
  541 SATTNSITIK NLKPNTEYTF SVIAKDATGN KSQPTALTVK TDEANTTPPD GNGTATFSVT 600
  601 SNWGSGYNFS IITKNNGTTP IKNWKLEFDY SGNLTQVWDS KINSKTNNHY VITNAGWNGE 660
  661 IPPGGSITIG GAGTGNPAEL LNAVISEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle