YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7594903
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILSLPSTL FSLVDCQVPK NLTYGNVSSV TLIPMARSQF QPQKRRNFGT SNTTPGFSWM  60
   61 ATVGEKVQVS TVPTSVPVRV ALELLQAGHR YLDVRTAEEF SDGHAPGAIN IPYMFRIGSG 120
  121 MTKNPNFLEE VLERFGKDDE IIVGCQLGKR SFMATSDLLA AGFTGVTDIA GGYAAWTENG 180
  181 LPTDS

Type	Start	End	Confidence
Signal Peptide	1	16	0.85
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	185	0.93