YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14190051
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVAAWLPF ARAAAIGWVP IANNPLPAPP IPKDKRRPDD EKLLINVSGR RFETWRNTLE  60
   61 KYPDTLLGSN EREFFYDEET KEYFFDRDPD IFRHILNYYR TGKLHYPKHE CLTSYDEELA 120
  121 FFGIIPDVIG DCCYEDYRDR KRENAERLLD DKLSESGEQD KYVYRTIRER MWRAFENPHT 180
  181 STAALVFYYV TGFFIAVSVM ANVVETVPCG RLPGKKESQP CGERYKIIFF CGDTACVMIF 240
  241 TAEYLLRMFA APDRCKFVRS VMSIIDVVAI LPYYIGLGIT DNDDVSGAFV TLRVFRVFRI 300
  301 FKFSRHSQGL RILGYTLKSC ASELGFLVFS LAMAIIIFAT VMFYAEKNVE DTTFTSIPSA 360
  361 FWYTIVTMTT LGYGDMVPHT PTGKIVGGVC SLSGVLVIAL PVPVIVSNFS RIYHQNQRAD 420
  421 KRKAQKKARL ARIRIAKASS GAAFVSKKKA AEARLAAQES GLEMDEFTKE EDIFEMQHHH 480
  481 LLRCLEKTTD REFVELEVPY NGQPNRPGSA SPPQSRSPSL SSHTNFTVTC CGRRFGGKSY 540
  541 QCKGGTGGER GYDEELNEIH VRDKTLLNTA TPDRGGWGLL NQQVGGPPLH PSAITTTNTN 600
  601 TATSTSSSPG AAPSVVAVSK PNSTTTVTTA IVNLPTPSPN GDSDFPTPAL GSTPPANQAF 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle