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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUTF_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFYISATGI KKVTISNPGV GIGKGSGGCA AAAAALAARR FSSRTLLLLL LLLAIVLPFI  60
   61 FVRFAFLVLE SASVCDSPLD CMGLRLFRGG DTSLKIGEEL TRALVEETTD HQDVNGRGTK 120
  121 GSLESFDDLV KEMTLKRRDI RAFASVTKKM LLQMERKVQS AKHHELVYWH LASHGIPKSL 180
  181 HCLSLRLTEE YSVNAMARMR LPPPESVSRL TDPSFHHIVL LTDNVLAASV VISSTVQNAV 240
  241 NPEKFVFHIV TDKKTYTPMH AWFAINSASS PVVEVKGLHQ YDWPQEVNFK VREMLDIHRL 300
  301 IWRRHYQNLK DSDFSFVEGT HEQSLQALNP SCLALLNHLR IYIPKLFPDL NKIVLLDDDV 360
  361 VVQSDLSSLW ETDLNGKVVG AVVDSWCGDN CCPGRKYKDY FNFSHPLISS NLVQEDCAWL 420
  421 SGMNVFDLKA WRQTNITEAY STWLRLSVRS GLQLWQPGAL PPTLLAFKGL TQSLEPSWHV 480
  481 AGLGSRSVKS PQEILKSASV LHFSGPAKPW LEISNPEVRS LWYRYVNSSD IFVRKCKIMN 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle