YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18253011, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF  60
   61 LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT FGIQLETQYL SGKTVSRFIP 120
  121 IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD 180
  181 HQSETIAEEE HDVSS

Type	Start	End	Confidence
Cytoplasmic	1	44	0.89
Transmembrane Helix	45	62	0.96
Non-Cytoplasmic	63	69	0.75
Transmembrane Helix	70	87	0.88
Cytoplasmic	88	195	0.86