YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37650718
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDLFLVAVHE LGHALGLEHS SDPSAIMAPF YQYMETHNFK LPLDDLQGIQ KIYAMLEPTR  60
   61 PLPTFPARRP HSTSERKHER QSRPGRPSAG DRPSSPGHGK PNICDGNFNT VAFFRREMFV 120
  121 FKDRWFWRLR NNKVQEGYPM LIDHFWKGLP HRIDAAYERS DGKFVFFKGD KYWIFKEVTA 180
  181 EPGYPHSLVE LGSYLPSDGI DTALRWESVG KTYFFKGDQY WRYNEEKRTT DPGYPKPIGI 240
  241 WKGIPDAPQG AFVSREGFYT YFYKGKDYWK FDNQKLTVEP GYPKSILKDW MGCDQSEVEK 300
  301 NKDRHLPHDD VDIMVAINDV PSTVNAIAVV IPCILSLCIL VLVYTIFQFK NKNVQQHVTY 360
  361 YKHPVQEWV

Type	Start	End	Confidence
Non-Cytoplasmic	1	325	0.80
Transmembrane Helix	326	347	0.86
Cytoplasmic	348	369	0.70