YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37606202
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLQTCTIIA GLFVSFVGIL LLVVNTEDFK EPAQLMYGIV LDAGSSHTSM FIYKWPADKQ  60
   61 NGTGIVSQHS ECRVKGGGIS SYAGIKGAAA RSLEECMDKA TKSIPKSRQR ITPVYLGATA 120
  121 GMRLLNISKP KESAEVLKEV GEKLKSYPFS FKGASILTGQ DEGAYGWITV NYLLENFIKY 180
  181 GFVGQWITPG RDTVGALDFG GASTQITFVT KQTVENKDDL MKLRLYGRDY QIYTHSFLCY 240
  241 GQDQALLRLL AHLIKTQGSD TSIVHPCYPA DYSSSIKLSS VFDTPCVKRQ TPYKPDDELQ 300
  301 IKGTGNYNQC LGNVSQLFSF SSCSYSKCSF DGVFQPNITG NFMAFSAFYY IHQFLQKAAG 360
  361 ITITSPADLE HAAQFVCNMS FQQMQNKFPT EGDHLRDYCA DSVLMRVLLI NGYGFSDLSF 420
  421 PHISFQEKVE DTSVGWSLGY MLSLSNLLDA ENAM

Type	Start	End	Confidence
Signal Peptide	1	26	0.72
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	454	0.96