YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29747871, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLTAAAWF LGTKNPPCLV LAARHASASS TNLKDVLRNL IPKEQARIKT FRKKHGKTVV  60
   61 GQITVDMMYG GMRGMKGLVY ETSVLDPDEG IRFRGYSIPE CQKLLPKAKG GKEPLPEGLF 120
  121 WLLVTGQMPT EEQVSWLSQE WVKRAALPSH VVTMLDNFPT KLHPMSQLSA AITVLNNESN 180
  181 FARAYAQGMN RTKYWELTYE DCMDLLAKLP CVAAKIYRNL YREDRNIEAI DSKLDWSHNF 240
  241 TNMLGYTDPQ FTELMRLYLT IHSDHEGGNV SAHTSHLVGS ALSDPYLSFA AALNGLAGPL 300
  301 HGLANQEVLV WLTQLQKEVG EDASDEKLKN YIWNTLNSGR VVPGYGHAVL RKTDPRYSCQ 360
  361 REFALKHLPK DPMFKLVGQL YKIVPDILLE QGKAKNPWPN VDAHSGVLLQ YYGMREMNYY 420
  421 TVLFGVSRAL GVLSQLIWSR ALGFPLERPK SMSTDALMKF VNSESG

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	466	0.98