YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPPE1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVRWGLKR QNFHPLRRRR RALLLKLTVV IISVLLFCEY FIYYLVLFRC HWPEVKTLAH  60
   61 GGRQEPVLKA MFLADTHLLG EIRGHWLDKL RREWQMERAF QTALWLLQPE VVFILGDIFD 120
  121 EGKWSSDQAW ADDVQRFQRM FRHDSHVQLK VVIGNHDVGF HYQMSKYRIK RFEKVFGSER 180
  181 LLSLKGVNFV MVNSVAMEGD GCIICSEEEA ELREISRKLN CSQEVPGSSQ CDREPEPRLP 240
  241 LSAPVLLQHY PLYRASDANC SGEDAAPPEE RNVPFEEKYD VLSREASQKL LWWLRPRLVL 300
  301 SGHTHSACEV LHPGGAPEVS VPSFSWRNRN NPSFIMGSLT SRDYALSKCY LPFEDTVLTM 360
  361 YGAAAGFLMI LILVHFEHLP SPFLCGWKLC RLHMRR

Type	Start	End	Confidence
Cytoplasmic	1	21	0.91
Transmembrane Helix	22	44	0.87
Non-Cytoplasmic	45	356	0.89
Transmembrane Helix	357	379	0.81
Cytoplasmic	380	396	0.76