YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29373127
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCRLSSAGR SSVKVVAPLG CLASRQKHTL PDLPYDYGAL QPHISAEIMQ LHHSKHHATY  60
   61 VNNLNVAEEK YKEALAKGDV TAQVSLQPAL KFNGGGHINH TIFWTNLSPN GGGEPKGELM 120
  121 DAIKRDFGSF ANFKEKLTAV SVGVQGSGWG WLGYNKEQGR LQIAACANQD PLQGTTGLIP 180
  181 LLGIDVWEHA YYLQYKNVRP DYLKAIWNVI NWDNVSSRYA ACKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.57
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	224	0.99