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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19481644, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYIDQGAFG AKSVMQQQYL LPPSNRLSKQ QPPLASSSLQ PSSSNKPRST SRVTDIFVVI  60
   61 TCVVLIAAFI SNSFSVTKNV VKLSKEQTEK ILEKDLPDKV YKLFENLKDG TFGIGEDEEE 120
  121 EREEREEGEE ELETKNIRLK RKWKEMTEQG DQGIKVRKLH GPRGERGETG PAGAVGPAGP 180
  181 QGERGAIGPA GKDGAVGPAG PQGERGAIGP AGKDGAVGPQ GPPGERGENG RPGRDGAVGP 240
  241 QGERGAIGPA GKDGAVGPQG ERGAIGPAGK DGAVGPAGPQ GERGENGRPG RDGAVGPAGP 300
  301 PGERGAIGPA GRDGAVGPAG PPGERGATGI PGRDGVDGSV GPQGERGEIG RPGRDGAVGP 360
  361 AGPQGRRGAT GRAGKDGAVG PAGPQGEKGE AGKDGSIGPQ GIQGPRGETG PPGRDGTAAE 420
  421 RGERGFPGPP GETGPPGKDG VDGSEGPQGK RGETGPVGPR GEPGLAGLPG RDGAIGPAGP 480
  481 PGERGATGLP GRNGVDGSIG PQGRRGATGR AGKDGAVGPA GPPGERGATG IPGRDGVDGS 540
  541 VGPPGERGET GPAGRDGSVG PAGPHGERGE NGRPGRDGAT GPIGPAGPQG EKGENGRPGR 600
  601 DGATGPIGPR GETGAMGKNG VDGSMGPQGR RGATGRAGKD GAVGPAGPPG ERGETGPAGR 660
  661 DGSVGPAGPQ GETGLTGSPG RDGATGPIGP AGPQGEKGEN GRPGRDGATG PIGPAGPQGE 720
  721 KGENGRPGRD GATGPIGPAG PQGETGLTGR PGRDGATGPI GPRGETGAMG KNGVDGSTGP 780
  781 QGRRGATGRA GKDGAVGPAG PPGERGENGR PGRDGATGPI GPAGPQGETG LAGLPGRDGA 840
  841 IGPQGEKGEN GRPGKDGATG PMGPPGERGE TGPIGPAGPQ GATGLPGRDG VDGSVGPQGK 900
  901 RGLIGRTGRD GAIGPVGPAG PKGETGLAGL PGIDGKDGSV GPQGAIGPIG PRGERGETGR 960
  961 PGRDGEDGST GPMGPQGLRG ATGAPGPQGE RGLKGRPGKD GETGPPGRQG RDGIMGPRGL1020
 1021 RGEKGAPGND GLEGPEGRDG APGPAGPIGP QGIRGLKGIQ GRPGRDGEMG PAGKDGIEGP1080
 1081 RGQDGTTGAK GPRGLRGFQG RTGETGAQGS RGEKGDRGLT GPQGRDGPPG EEGPQGLRGE1140
 1141 RGAPGPRGPR GIRGRSGPQG SNGVQGPRGP RGTKGRTGIQ GLTGIEGPRG PRGIQGKEGR1200
 1201 MGKIGHRGEK GDKGDRGEQG IAGADGEKGP RGLRGIRGPI GAPGKPGTEG VRGPRGVRGV1260
 1261 PGYPGAQGEL GPQGPTGPQG PAGPQGPMGR TGDTGPMGPP GAVGPRGEKG GRGRKGKNGP1320
 1321 KGADGKDAVN IIQKYSITHA RAEIMWEGNE IGEAYIGRSY GTDTIPVMIE NRIGMTNEDK1380
 1381 KNEYCIQVMT MHSITTRGRT SGVFVVSNKT DYILLVTLLM PESVSCRTDV STNARSERVN1440
 1441 AVRERESKSY RFIRPSDQSI GTHSRSKIAV VMYPDASMSY SVDTLDADVA RRETTSVLLL1500
 1501 AETIHGEKDR GFYADRGTVG RLMVPPTEEE LLVLQADPDI TPTIADPITV AEVGNPVVRI1560
 1561 KTPSCDELNK FMRFSTNFSF LKYVKRFMAQ RASSNSRNDM SAFLLDLIFE KLIEFLLSTG1620
 1621 WNREALGGTT GAILMIRTAT CRLAQSYYPL PETVGMDFLQ TPGFDYNKSF PNNERYIYEF1680
 1681 QATM

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