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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37528354, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNLIL WLVIAVVLMS LFQSFGPSDS NSRRVDYSTF INELAQDQVR EVRITGREIN  60
   61 VSRKDNSRYT TYLPVQDEKL LDTLLNKNVK VVGEPPEEPS LLTSIFISWF PMLLLIGVWI 120
  121 FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTTFADVAGC DEAKEEVGEL VEYLREPGRF 180
  181 QKLGGKIPKG ILMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF 240
  241 EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT 300
  301 NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLDTDVDAS VIARGTPGFS 360
  361 GADLANLVNE AALFAARGNR RVVSMVEFEK AKDKIMMGAE RRSMVMTEEQ KESTAYHEAG 420
  421 HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDQISA SRQKLESQIS TLYGGRLAEE 480
  481 IIYGPDSVST GASNDIKVAT SIARNMVTQW GFSEKLGPLL YAEEEGEVFL GRSVAKAKHM 540
  541 SDETARLIDQ EVKAIIDHNY QRARQILMDN LDVLHSMKDA LMKYETIDAP QIDDLMNRTN 600
  601 VRPPAGWESD NGSSNNSRPT GNTPPPQAAK PTDDINTLAQ GGEQVGQSGN KDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle