YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37526166, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLVEIFCD VDDFCRFFIP QWELFCFEKG YRQRHRQGHM HPSEIMTILI LFHMAHYRDF  60
   61 KHFYLEHIWK YHHKDFPTLL SYTRFVSVAP SVLVPLCSYL TQLKGKPTKI AFIDSTSLCV 120
  121 CHNIRIPRHK VFKGIAQRGK TSMGWFYGFK LHLVVNHQGE ILALKVTPGN VNDREPVREL 180
  181 SKSLTGYLYG DKGYLSQELA DDLAKIGVTF ITKKRRNMKA QALSEWNNLM LKKRFIIETI 240
  241 NGQLKTISQI EHSRHRSIKG FLLCVLGGLI AYSLKLKKPS LKIFYSEKDI LMTA

Type	Start	End	Confidence
Non-Cytoplasmic	1	256	0.58
Transmembrane Helix	257	276	0.63
Cytoplasmic	277	294	0.43