YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DSBD_PHOLL
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	177	0.99
Transmembrane Helix	178	200	0.93
Cytoplasmic	201	218	0.86
Transmembrane Helix	219	241	0.91
Non-Cytoplasmic	242	252	0.79
Transmembrane Helix	253	275	0.93
Cytoplasmic	276	295	0.92
Transmembrane Helix	296	319	0.92
Non-Cytoplasmic	320	337	0.73
Transmembrane Helix	338	358	0.93
Cytoplasmic	359	369	0.82
Transmembrane Helix	370	387	0.93
Non-Cytoplasmic	388	395	0.69
Transmembrane Helix	396	416	0.91
Cytoplasmic	417	424	0.77
Transmembrane Helix	425	446	0.83
Non-Cytoplasmic	447	575	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRTLMLFL LLCSPLLTPA AANALFEQPG QNPYLPVDQA FMFDFQQKGD KLTLDWQIKP  60
   61 GYYLYHKQLH IEPQQATLGK ITLPQGTAHR DEFFGETEVY FQQLIVNVPV TKANNNSNIV 120
  121 VTYQGCAAAG YCYPPETRLV PLSAVIPSKT TDAISAEPVH KTPESASNDQ QHLPFSPLWA 180
  181 ILIGIGIAFT PCVLPMYPLI SSIILGSQRP KSLKQIFWLA LSYVQGMAVT YTLLGLIVAA 240
  241 AGLQFQAALQ HPYVLIGLSV LFILLALSMF GLYSLQLPSA VQTRLVNWSN QQKNGSLFGV 300
  301 FAMGALAGLI CSPCTTAPLS AILLYIAQSG NTVAGGLTLY LYALGMGLPL IAVTLFGHKL 360
  361 LPRSGPWMQY VKEAFGFIIL ALPVFLLERV IGDAWGIRLW SLLAVSFLGW GFVLTIRSQN 420
  421 GWVRVIQLIL LILMLIATRP LQDWFWGTTV TQQSQHSLNF RQINNWQELE QIMTQNSHKT 480
  481 VMLDFYADWC TACKEFEKYT FSDPQVQSQL GDTLLLQANV TNNSPQQKQL LEKLSVRGLP 540
  541 TILFFDSQGK EIPDSRVNGF MDATRFNEHL QHLPK