YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37527916, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQYRSHGRW IIWLSFLIAM VLQIMPWPEQ IYMYRPTWSA LLLIYWVMAL PHRVSVGTGF  60
   61 ILGIIVDLIQ GATLGVNALA YSLVSYLVSF KFQLFRNMAL WQQALVVVAL SVLMDFSVFW 120
  121 AEFLLSNVAF HPEVFWNSLV NGILWPWLFL LMRKIRRQFN VH

Type	Start	End	Confidence
Cytoplasmic	1	9	0.55
Transmembrane Helix	10	28	0.92
Non-Cytoplasmic	29	55	0.49
Transmembrane Helix	56	88	0.68
Cytoplasmic	89	98	0.80
Transmembrane Helix	99	121	0.87
Non-Cytoplasmic	122	133	0.69
Transmembrane Helix	134	151	0.94
Cytoplasmic	152	162	0.90