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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|36787299, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLRGLAQY YVDLMMKLGL VRFSLLLASA LVVLAMGVQM VVTFLLQGGV QSIDLVRSIF  60
   61 FGLLITPWAV YFLSVVVEQL EESRQRLSKL VEKLEVMRQR DRELNQQLKD NIIKLNQEIS 120
  121 EREKAEQAHL ILLDKLKEEM KHREQTQIEL EQQSVLLKSF LDASPDLVYY RNENNEFSGC 180
  181 NRAMELLTGK SQKQLVGLTP NDVYDKEVAR KVMKTDEKVF RHNVALTYEQ WLVYPDGRKA 240
  241 CFELRKVPFY DRVGKRHGLM GFGRDITERK RYQDALENAS RDKTTFISTI SHELRTPLNG 300
  301 IVGLSRILLD TELTSEQNNY LKTIHVSAIT LGNIFNDIIE MDKIERRKVQ IDNQPIDFTG 360
  361 FMSDLENLSG LLVQPKDIKF VMNPELPLPA RIMTDGTRLR QILWNLIGNA VKFTQKGEIT 420
  421 VRIWYEEGER LLFEVTDTGI GIPHDELEKI FAMYYQVKGS HGGCPATGTG IGLAVSKRLA 480
  481 QSMGGDIVVE SEPGQGSRFT LSIIAPAMEE NLLCKEDTED YPLPALHILL VEDIELNVIV 540
  541 ARSVLEKLGN SVEVAMNGKD ALEVFKPGEF DLVLLDIQLP DMTGLDISRE LSQRYAKKDL 600
  601 PPLIALTANV LKDKKEYLDA GMNGVLSKPL SVNALTAIIE QYWGEQSVHH MQPEEEESGL 660
  661 MKKDEDLLDT EMLNQYIELV GPQLIRNSLS VFEKMMPGYL SVLDSNMTAK DQKGITEEAH 720
  721 KIKGAAGSVG LRHLQQLAQQ IQSPDLPAWW DNVQEWVDEL KQEWRKDTEI LGEWLTDAEK 780
  781 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle