YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36786133, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRRRLSRL GRLRKVKRLR HQRFRSRIFY RDNRLALNMK KPYIVVLTGA GISAESGIRT  60
   61 FRSSDGLWEE HRVEDVATPE GFQKDPELVQ AFYNARRHQL QQSEIKPNVA HYALAALEHE 120
  121 LGDNFLLITQ NIDDLHERAG SYRTVHMHGE LFKIRCCQSG QVFEWTDDLT TDERCHCCQF 180
  181 PSPLRPHVVW FGEMPLEMEQ IYSALAQADI FIAIGTSGHV YPAAGFVHEA KLAGAHTVEL 240
  241 NLEPSQVESL FDEKHYGPAS KIVDEYARRL IDSIKEFKAD LTQ

Type	Start	End	Confidence
Signal Peptide	1	56	0.94
N-region	1	47
H-region	48	53
C-region	54	56
Cleavage Site	56	57
Non-Cytoplasmic	57	283	0.99