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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37526609, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEKLKQSAL DFHQFPQPGK ITITPTKPLI TQRDLALAYS PGVAAPCLEI AEDPLAAYKY  60
   61 TARGNLVAVI SNGSAVLGLG NIGALAGKPV MEGKGVLFKK FSGIDVFDIE VDESDPDKLI 120
  121 DIIAALEPTF GGINLEDIKA PECFYIEKKL REKMNIPVFH DDQHGTAIIC TAAVLNGLRI 180
  181 MKKEISAVRL VVSGAGAASI ACMNLLVALG LQRKNIVVCD SKGVIYRGRD KNMEETKAAY 240
  241 AIEDNGSRTL GDVIPGADIF LGCSGPGVLT QDMVKMMAKD PLIMALANPE PEILPPLAKQ 300
  301 VRPDAIICTG RSDYPNQVNN VLCFPFIFRG ALDVGATTIN EEMKLACVHA IADLALAEQS 360
  361 EEVASAYDDQ DLFFGPEYII PKPFDPRLIV KIAPAVAKAA MDSGVATRPI KDFGAYIEKL 420
  421 NEFVYKTNLF MKPIFSQAKK AKKRIVLAEG EEVRVLHATQ ELISLGLAYP ILIGRPSVIE 480
  481 MRIQKLGLHI EAGKDFEVVN NENDPRFKKY WQEYHHIMKR RGVSAEQARR AVIGNPTLIG 540
  541 AIMVLRGEAD GLICGTVGSY SEHYDVVRNV FGFRDGVHTA GAMNALMLPS GNTFIADTYV 600
  601 NNDPTPEQLA EITLMASETI RRFGIEPKVA LLSHSSFGST DCLSAQKMRQ TLELVNKMSP 660
  661 SLEIDGEMHG DAALVESIRR DIMPDSPLKG AANLLIMPNM ESARISYNLL RVTSSEGVTV 720
  721 GPVLMGVAKP IHILTPISSV RRIVNMVALA AVEAQTHPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle