YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37526074, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYQRLFTVI FLYIISINFA IAGVVIGGTR VIYMSDKKEA SISISNPEKD APYLIQSWIQ  60
   61 DENDNMKTPF IVTPPIFKLA ADHENILRIV KTESNLPQDR ESLFWLNVKS IPTSVKSNQN 120
  121 QLQITVKSKF KLFYRPANLA EKSSTAYKEL KFRTENNSLI AENPTPYFIS FSYLKVDQHE 180
  181 IKPAGMIKPF SQLSWPLPAK NIKQVNWKAI NDFGGATAEE KTTI

Type	Start	End	Confidence
Cytoplasmic	1	8	0.45
Transmembrane Helix	9	33	0.86
Non-Cytoplasmic	34	224	0.51