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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37527684, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYTTILTLQ GLSCMHCVNS VKKALANRTD VEQADITIDY AKIIGKASTE SLIETIQAAG  60
   61 YDAMIASQPD VELTLSGLSC MHCAGTTRKA LEAVDGVIAA EVNTEKAKVY GKADADTLIA 120
  121 AVERAGYHAK LASGQNSPKS EPLTLPASNR PEPLAAATSS VPVEKADVSV VSDSNESIQL 180
  181 LLDGMTCASC VNKVQKALQG VDGVENARVN LAERSALITG SASPEALIKA VEKAGYGAEL 240
  241 IQDETKRRER QQQVSDANMR RFRWQSALAL VVGIPVMVWG MMGDNMMLTP ENHHIWLTIG 300
  301 VITLAVMIFA GGHFYRNAWQ SLKNGSATMD TLVALGTGAA WLYSISVNLW PDIFPPQARH 360
  361 LYYEASAMII GLINLGHALE QRARQRSSKA LERLLDLTPP TARVVTEDGE KEIPLADVKP 420
  421 GMTLRLTTGD RVPVDGEIIQ GEVWIDEAML TGEPIPQQKT KGDNIHAGTT VQDGTVLFTA 480
  481 AAVGSQTTLA RIIKLVRQAQ SSKPEIGQLA DKISAVFVPV VVAIALIAGA IWYFVGPAPQ 540
  541 IMYSLVIITT VLIIACPCAL GLATPMSIIS GVGRAAEFGV LVRDADALQQ ASTLDTLVFD 600
  601 KTGTLTEGMP QVTDIHTFNG YSEQEVLRWA GALEQGSNHP LAKAILAKAK GLTLPQVEQF 660
  661 RTLAGLGISG EVNGTTLLLG NQAWLEQNQI DTQELKSLIA QQAEQGITPV LLAAGGQAAA 720
  721 VLSIRDPLRE DTMTALQRLH HQGYRLVMLT GDNPVTANAI AKEAGIDQVI AGVLPDGKAE 780
  781 VIQKLQAAGR KVAMVGDGIN DAPALAQADV GIAMGGGSDI AIETAAITLM RHSLHGVADA 840
  841 VELSKGTLRN MKQNLLGAFI YNTLGIPIAA GVLYPFTGTL LDPVVAGAAM ALSSITVVSN 900
  901 ANRLLRFKPK F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle