YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37527058, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNIMEFLTH FVDFAKFIID FILHIDIHLA ELVAQYGDWV YGILFLILFC ETGLVITPFL  60
   61 PGDSLLFVAG ALAALGSNDL NVHIMVALMI IAAIIGDAVN YAIGRIFGER LFTNPNSKIF 120
  121 RRSYLDKTHE FYEKHGGKAI ILARFVPIIR TFAPFVAGMG KMSYRRFAAY NVIGALVWVL 180
  181 LFTYSGYIFG DMPMVQQNLK LLIVAIIFIS ILPGVIEIWR HRRTVMKQKS DNR

Type	Start	End	Confidence
Cytoplasmic	1	38	0.66
Transmembrane Helix	39	61	0.86
Non-Cytoplasmic	62	81	0.73
Transmembrane Helix	82	103	0.91
Cytoplasmic	104	166	0.87
Transmembrane Helix	167	188	0.93
Non-Cytoplasmic	189	198	0.85
Transmembrane Helix	199	219	0.93
Cytoplasmic	220	233	0.95