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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37527013, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRENISADA DTLSSALNCC RLLLQLAKGE AQEPQPLLSH NKLKPAIKEY GKAHDVDLAL  60
   61 CRLKFPKLTP KLLPLAFRDK QGGFIVLARL STDQALIQSP YAVSPEVLSI NELEARWSGE 120
  121 VIRLGEASLR FDVSWFIPAF IRHRHLLGEV LLFSLMLQLL ALVTPLFFQV VMDKVLVHKA 180
  181 LSTLEVLVIV LVVVGLFEVV LRGLREYLFA HTANRIDITL GIKLFRHLLG LPLLYFKHRQ 240
  241 VGAIITRVQE LDSIRDFLTG SMLTLSVDLA STFVFFGVMA WLSPSLTCVV LAVLPLYFLL 300
  301 AWLSSKPLQQ RIEQQFQTAA LNTSFLNESV SGAETIKSLA VEPKMQRRWE SQTANMVEAG 360
  361 FRTQTLNSFI SHGVMLLQKT TGVGIIWLGA NMVIALELTI GQLIAFNMMV SHVNQPIAKL 420
  421 IDLWQQFIQT RVAVDKLGDI LNLPVEQEQG NIRPQQPLSG DLQIRNLVFR YQPHQAPVLQ 480
  481 GVTLHIRSGE KLGIVGPSGS GKSTLTRLLQ KLYAPDEGEI LIDGTPLHRL DPGYLRSQIG 540
  541 VVLQENYLFN RSVRHNIAFK DPSASLEKVM AVAKLAGAHD FILQLPLGYD TVLAEAGSSL 600
  601 SGGQRQRIAI ARALMANPKI LIFDEATSAL DDESQALIQT NMAEIALGRT VIIIAHRLST 660
  661 VRHCDRIITL EQGLITESGN HHQLLVKGGC YAKLWQMQQE LRKEAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle