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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37526984, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTIMLIPT STSVGLTSVS LGVIRSMEQK GVSLSVFKPI AQPRCRAAQD QTTTIIRANS  60
   61 SIKTAEPLDM AHVESLLTTN QKDVLMEKIV ALYHENTKDA EVILIEGLVP TRKHSFAQSL 120
  121 NYEIAKTLNA EIVFVLALGN DSPEQLKERV ELARAEFGGN KNQNITGVII NKLNAPVDDQ 180
  181 GRTRPDLSEI FDESSKAIVS NIDPNTLFKN SPLPILGCIP WSFDLIATRA IDMAKHLNAR 240
  241 IINEGAIKTR RVKSVTFCAR SIPHMLEHFR PGSLLVTSAD RPDVLVSACL AAMNGVEIGA 300
  301 ILLTGGYAID EPIKQLCERA FNTGLPVFMV DTNTWQTSLN LQSFSLEVPA DDHERIEKLQ 360
  361 NYVAHHINKE WIDSLTANSE RPHRLSPPAF RYQLTELARK AGKRVVLPEG DEPRTVKAAS 420
  421 ICADRGIARC VLLGDPEEIR RVAAAQGVEL GAGIEIVDPI AVRERYVPRL VELRKNKGMT 480
  481 EVVAREQLED NVVLGTLMLE QGEVDGLVSG AVHTTANTIR PPLQLIKTAP GSSLVSSVFF 540
  541 MLLPEQVLVY GDCAINPDPT AEQLSEIAIQ SADSAKAFGI EPRVAMISYS TGNSGAGSDV 600
  601 EKVREATRLA QEKRPDLIID GPLQYDAAIM ADVAKSKAPN SPVAGQATVF IFPDLNTGNT 660
  661 TYKAVQRSAD LVSIGPMLQG MRKPVNDLSR GALVDDIVYT VALTAIQSAQ GEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle