YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37525837, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAINIIGLF AFFFITSMAW GNNLPQAMEH YFQQIHRDNH YKVSVNIRTP EQQWPQCERP  60
   61 EIQPAIGGQN WGNLSLPVIC HQQRKFIQVA VSVTGNYLVT RRAISRNDVL SDKDFQVRRG 120
  121 LLERLPHDLV INKNEIKNSI AIRNIPAGQA ITHNMLRRPW VVRSGQSVAV IIQGNGFQIR 180
  181 NEGKAINNAA ISDKVRVRIN SGHVITGQAL ENGNVKIML

Type	Start	End	Confidence
Signal Peptide	1	21	0.90
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	219	0.98