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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37525819, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLASILRL PGNMKGSQWQ MLAGPVLILL ILSMMVLPLP PFMLDLLFTF NIALSIMVLL  60
   61 VAMFTRRTLD FAAFPTILLF STLLRLSLNV ASTRIILLEG HTGSAAAGHV VEAFGHFLVG 120
  121 GNFAIGIVVF IILVLINFMV ITKGAGRIAE VGARFVLDGM PGKQMAIDAD LNAGLIGEEE 180
  181 AKKRRAEVTQ ESDFYGSMDG ASKFVRGDAI AGLMILVINV VGGLIVGVAQ HGMSLGDAGE 240
  241 AYTLLTIGDG LVAQLPALII STAAGVIVTR VATDQDVGQQ MVTQLFNNPR VMMLSAGVLG 300
  301 LLGMVPGMPN FVFLLFTAAL AGLGWYLYRR TDAPAINTEK PKIEEQQQTS EASWSDVQLE 360
  361 DPLGMEVGYR LIPMVDFRQN GELLGRISGI RKKFAQEMGY LPPVVHIRDN LELAPAGYRI 420
  421 LMKGVEIGRG EAHPGRWLAI NPGGAVGELP GDITKDPAFG LSAVWIDDSL REQAQVQGYT 480
  481 VVAASTVVAT HMNHLLTQYA NELFGRQEAQ QLFERVSQEM PKLTEDFIPD VVNLTTLHKV 540
  541 LQNLLSEQVP IRDMRTIIET LAEHAPGQTD PYELTSLVRI ALGRAIAQQW FPGAQEIQVI 600
  601 GLDAGLERLL IQALQNGGGL EPGLADNLQR QATEALQRQE MLGAPPVLLV NHALRPLLSR 660
  661 FLRRTLPQLV VLSNLEISDN RQIRMTATIG GNG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle