YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36784962, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLFAALL GTVALSATAT EKEIIRFATE ATYPPFEFID ANNKIQGFDV DLANAICEKI  60
   61 NATCTFTNQS FDSLIPSLKF RRFDALAAGI DITPERQKQV DFTNTYYDNS AVFISVKGKV 120
  121 SSTAELKGKL VGIQNGTTHQ KYLMEQRKEI KTVPYDSYQN AILDLKNGRL DAVFGDTAVV 180
  181 NEWLKKNENL STVGNKVTDK NYFGIGLGIA VRKGNKDLQD KLNKALADIK RDGTYDIIYE 240
  241 KWFK

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	244	0.99