YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37525404, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDMNILDLF LKAGLLVQLI MLILICFSVA SWAIIIQRTK ILNAATRESE AFEDKFWSGI  60
   61 ELSRLYKESQ SRRDSLGGTE QIFYSGFKEF ARLHHANNHA PEAVITGASR AMRISMNREL 120
  121 ESLESHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI 180
  181 GLFAAIPAVM AYNRLNQRVN KLEQNYDNFM EEFLAILHRQ AFAAENKAEN K

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.87
Transmembrane Helix	14	36	0.92
Cytoplasmic	37	128	0.91
Transmembrane Helix	129	155	0.75
Non-Cytoplasmic	156	170	0.74
Transmembrane Helix	171	192	0.90
Cytoplasmic	193	231	0.92